Molecular Visualizations

Image 1: My favourite and the most abundant protein on Earth, RubisCO visualized in Blender

https://www.youtube.com/watch?v=6bcYcAm4iW4

Video 1: RubisCO active enzymatic site interaction animation.

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https://www.youtube.com/watch?v=sHwcQnq_akg

Video 2: AF-P60995-F1 folding over to more stable shape. 1s = 500 femto-seconds

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https://www.youtube.com/watch?v=LKzM7FQI2qI

Video 3: Pretty cool stuff! I took the Ubiquitin protein and progressively introduced genetic mutations by inserting random tri-nucleotide repeat. Each mutagenesis cycle was then processed by Alpha Fold model.

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https://www.youtube.com/watch?v=-h6JJzjDHP4

Video 4: Molecular dynamics simulation of interaction between the antigen-binding region from the monoclonal anti-lysozome antibody and the antigen, hen egg white lysozome.

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https://www.youtube.com/watch?v=yULmBiyuwGM

Video 5: My first successful molecular simulation of a protein folding using Gaisteger solver (that is also considering hydrogen bonding) protein used: AF-P60995-F1 (e-coli) short peptide seq

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